GlycoProtDB ID - GPDB0001250


Protein Name Alpha v integrin
Protein Accession Number A0A0F7IQ06
Gene Itgav
Length 1044
Status
release : 2016-12-05

Glycosylation Sites

Schema of N-glycosylation site(s) of the protein

Sequence

(__:Potential Sequon , N:Identified Site)

1
101
201
301
401
501
601
701
801
901
1001
MAAPGRLLLR PRPGGLLLLL PGLLLPLADA FNLDVESPAE YAGPEGSYFG FAVDFFEPST SSRMFLLVGA PKANTTQPGI VEGGQVLKCE CSSSRRCQPI
EFDSTGNRDY AKDDPLEFKS HQWFGASVRS KQDKILACAP LYHWRTEMKQ EREPVGTCFL QDGTKTVEYA PCRSKNIDAD GQGFCQGGFS IDFTKADRVL
LGGPGSFYWQ GQLISDQVAE IISKYDPNVY SIKYNNQLAT RTAQAIFDDS YLGYSVAVGD FNGDGIEDFV SGVPRAARTL GMVYIYDGKN MSSLHNFTGE
QMAAYFGFSV AATDINGDDY ADVFIGAPLF MDRGSDGKLQ EVGQVSVSLQ RAVGDFQTTK LNGFEVFARF GSAIAPLGDL DQDGFNDIAI AAPYGGEDKK
GLVYIFNGRS TGLNSVPSQI LEGQWAAQSM PPSFGYSMKG ATDVDRNGYP DLVVGAFGVD RAVLYRARPV VTVNAGLEVY PSILNQDNKI CPLPGTALKV
SCFNVRFCLK ADGKGTLPRK LHFQVDVLLD KLKQKGAIRR ALFLHNRSPV HSKTMTVFRG GQMQCEELVA YLRDESEFRD KLTPITIFME YRLDQRTAAD
ATGLQPILNQ FTPANVSRQA HILLDCGEDN VCKPKLEVSV NSDQKKIYIG DDNPLTLTVK AQNQGEGAYE AELIVSIPPQ ADFIGVVRNN EALARLSCAF
KTENQTRQVV CDLGNPMKAG TQLLAGLRFS VHQQSEMDTS VKFDLKIQSS NSFDNVSPVV SYKVDLAEKA AVEIRGVSSP DHIFLPIPNW EYKENPETEE
DVGPIVQHIY ELRNNGPSSF SKAILNLQWP YKYNNNTLLY ILHYDIDGPM NCTADTEINP LRIKTPEKND TGAAGQGERS HLITKRGLTL REGDVHTLGC
GIAKCLQITC QVGRLDRGKS AILYVKSLLW TETFMNKENQ NHSYSLKSSA SFNIIEFPYK NLPIEDLFNS TLVTTNITWG IQPAPMPVPV WVIILAVLAG
LLLLAVLVFV MYRMGFFKRV RPPQEEQERE QLQPHENGEG NSET

N-glycosylation sites

Potential sites Identified Peptide*1
Position Sequon Position Sequence Unique or Shared
74 NTT 73 - 88
ANTTQPGIVEGGQVLK
Shared ( 10 )
290 NMS
296 NFT
546 NRS
615 NVS 597 - 618
TAADATGLQPILNQFTPANVSR
Shared ( 4 )
630 NVC
704 NQT 696 - 707
LSCAFKTENQTR
Shared ( 4 )
755 NVS
835 NNT 833 - 862
YNNNTLLYILHYDIDGPMNCTADTEINPLR
Shared ( 4 )
833 - 864
YNNNTLLYILHYDIDGPMNCTADTEINPLRIK
Shared ( 4 )
833 - 862
YNNNTLLYILHYDIDGPMNCTADTEINPLR
Shared ( 4 )
851 NCT 833 - 864
YNNNTLLYILHYDIDGPMNCTADTEINPLRIK
Shared ( 4 )
833 - 864
YNNNTLLYILHYDIDGPMNCTADTEINPLRIK
Shared ( 4 )
833 - 862
YNNNTLLYILHYDIDGPMNCTADTEINPLR
Shared ( 4 )
833 - 862
YNNNTLLYILHYDIDGPMNCTADTEINPLR
Shared ( 4 )
833 - 864
YNNNTLLYILHYDIDGPMNCTADTEINPLRIK
Shared ( 4 )
833 - 862
YNNNTLLYILHYDIDGPMNCTADTEINPLR
Shared ( 4 )
833 - 862
YNNNTLLYILHYDIDGPMNCTADTEINPLR
Shared ( 4 )
869 NDT
941 NHS 938 - 947
ENQNHSYSLK
Shared ( 6 )
969 NST
976 NIT
Brain Colon Heart Kidney Kidney(Fut9 KO) Kidney(Fut9 WT) Liver Liver: b4GalT-I(+/+) Liver: b4GalT-I(-/-) Lung Skeletal_muscle Stomach Testis
ConA RCA120 Amide80 ConA RCA120 ConA RCA120 AAL ConA RCA120 AAL(+) AAL(+) ConA RCA120 SSA RCA120 RCA120 ConA RCA120 ConA RCA120 Amide80 ConA RCA120 ConA
               
         
 
 
         
                                                 
                                                 
                                                 
 
       
     
       
 
   
 
                                                 
         
   
 
           
                                                 
       
 
                 
               
   
                                         
       
       
       
       
 
 
       
                                       
       
                                       
                             
                 
       
 
                 
               
   
                                         
                                         
     
       
       
       
       
 
 
                                                 
               
   
         
             
                                                 
                                                 
*1:   _:Potential Sequon     :Asn (glycosylated)     :Gln (deaminated:pyroGlu)     :Met (oxidized)     :Cys (carbamidomethylated and deaminated)

External Links

Publications

Noro E, Togayachi A, Sato T, Tomioka A, Fujita M, Sukegawa M, Suzuki N, Kaji H, Narimatsu H Large-Scale Identification of N-Glycan Glycoproteins Carrying Lewis x and Site-Specific N-Glycan Alterations in Fut9 Knockout Mice. J Proteome Res 2015;14(9):3823-34 PMID:26244810
Sugahara D, Kaji H, Sugihara K, Asano M, Narimatsu H Large-scale identification of target proteins of a glycosyltransferase isozyme by Lectin-IGOT-LC/MS, an LC/MS-based glycoproteomic approach Sci Rep 2012;2(): PMID:23002422
Kaji H, Shikanai T, Sasaki-Sawa A, et al Large-scale Identification of N-Glycosylated Proteins of Mouse Tissues and Construction of a Glycoprotein Database, GlycoProtDB J Proteome Res 2012;11(9):4553-4566 PMID:22823882
Kaji H, Yamauchi Y, Takahashi N, Isobe T Mass spectrometric identification of N-linked glycopeptides using lectin-mediated affinity capture and glycosylation site--specific stable isotope tagging Nat Protocols 2007;1(6):3019-3027 PMID:17406563

Entry information

Entry version 2016-12-05
protein sequence version 2016-12-05
Entry status Latest version
Entry history

create : 2016-12-05