GlycoProtDB ID - GPDB0001815


Protein Name CD93 antigen (Fragment)
Protein Accession Number A7LNR1
Gene Cd93
Length 307
Status
release : 2016-12-05

Glycosylation Sites

Schema of N-glycosylation site(s) of the protein

Sequence

(__:Potential Sequon , N:Identified Site)

1
101
201
301
AADSQAVVCE GTACYTAHWG KLSAAEAQHR CNENGGNLAT VKSEEEARHV QQALTQLLKT KAPLEAKMGK FWIGLQREKG NCTYHDLPMR GFSWVGGGED
TAYSNWYKAS KSSCIFKRCV SLILDLSLTP HPSHLPKWHE SPCGTPEAPG NSIEGFLCKF NFKGMCRPLA LGGPGRVTYT TPFQATTSSL EAVPFASVAN
VACGDEAKSE THYFLCNEKT PGIFHWGSSG PLCVSPKFGC SFNNGGCQQD CFEGGDGSFR CGCRPGFRLL DDLVTCASRN PCSSNPCTGG GMCHSVPLSE
NYTCRCP

N-glycosylation sites

Potential sites Identified Peptide*1
Position Sequon Position Sequence Unique or Shared
81 NCT 80 - 90
GNCTYHDLPMR
Shared ( 4 )
78 - 90
EKGNCTYHDLPMR
Shared ( 4 )
80 - 90
GNCTYHDLPMR
Shared ( 4 )
301 NYT
Heart Kidney(Fut9 KO) Kidney(Fut9 WT) Liver: b4GalT-I(+/+) Lung Serum
RCA120 AAL(+) AAL(+) RCA120 ConA Amide80
 
       
       
 
           
*1:   _:Potential Sequon     :Asn (glycosylated)     :Gln (deaminated:pyroGlu)     :Met (oxidized)     :Cys (carbamidomethylated and deaminated)

External Links

Publications

Noro E, Togayachi A, Sato T, Tomioka A, Fujita M, Sukegawa M, Suzuki N, Kaji H, Narimatsu H Large-Scale Identification of N-Glycan Glycoproteins Carrying Lewis x and Site-Specific N-Glycan Alterations in Fut9 Knockout Mice. J Proteome Res 2015;14(9):3823-34 PMID:26244810
Sugahara D, Kaji H, Sugihara K, Asano M, Narimatsu H Large-scale identification of target proteins of a glycosyltransferase isozyme by Lectin-IGOT-LC/MS, an LC/MS-based glycoproteomic approach Sci Rep 2012;2(): PMID:23002422
Kaji H, Shikanai T, Sasaki-Sawa A, et al Large-scale Identification of N-Glycosylated Proteins of Mouse Tissues and Construction of a Glycoprotein Database, GlycoProtDB J Proteome Res 2012;11(9):4553-4566 PMID:22823882

Entry information

Entry version 2016-12-05
protein sequence version 2016-12-05
Entry status Latest version
Entry history

create : 2016-12-05