GlycoProtDB ID - GPDB0001960


Protein Name Abi3bp protein
Protein Accession Number B2RWZ0
Gene Abi3bp
Length 884
Status
release : 2016-12-05

Glycosylation Sites

Schema of N-glycosylation site(s) of the protein

Sequence

(__:Potential Sequon , N:Identified Site)

1
101
201
301
401
501
601
701
801
MLSSLGCLLL CGSIALALGN AQKLPKGKKP SLKVHINTTS DSILLKFLRP NANVKLEGFL LGYGSNVSPN QYFPLPTEGK FTEAVVDAEP KYLIVVRPAP
PPSQKKSCSG KSRPRKPLQL VVGTLTPSSV FLSWGFLINP HHDWTLPSHC PSDRFYTIRY REKDKEKKWI FQLCPATETI VENLKPNTVY EFGVKDNIEG
GIWSKIFNHK TIVGSKNKVN GKIQSTYDQV HSVPVPRKLI PLTIIKQVIQ NVTHRASTKS PDKTPFGGTI LVHLIIPGLN ESTVKLPTSI MLEISDALKA
QLAKNETLAL PAESKTPEVE KLAGQPVTAP RQTTSMPPKL KTPHSRMPAK EPVPKEPLHT TSKPKMPPSP EVADTTSAPL ETRGIPLIPV ISPRPSQEEL
QTAMEETDQS TQELFTTKIP QTTELAKTTQ APHRLHTAPV RPRIPGRPHG RPALNKTTTR PDKTKPRGTS HKNGVGTGTK QAPKPPSPGR NASVDSHATR
KPGSVSGTRR PPIPHRHSST RPVSQERRPL PPNNVTGKPG RAGIVSSSRV TSPPLKATLH PIGTATARPG AEQKEPTAPA SEEEFGTTTD FSSSPTKETD
PLGKPRFIGP HVRYIPKPEN KPCSITDSVR RFPTEEATEG NATSPPQNPP TNLTVVTVEG CPSFVILDWE KPLNDTVTEY EVISRENGSF SGKNKSIQIT
NQTFSTVENL KPDTSYEFQV KPKNPLGEGP ASNTVAFSTE SADPRVSEPI SAGRDAIWTE RPFNSDSYSE CKGKQYVKRT WYKKFVGVQL CNSLRYKIYL
SDSLTGKFYN IGDQRGHGED HCQFVDSFLD GRTGQQLTSE QLPTKEGYFR AVRQEPVQFG EIGGHTQINY VQWYECGTTI PGKW

N-glycosylation sites

Potential sites Identified Peptide*1
Position Sequon Position Sequence Unique or Shared
37 NTT 34 - 46
VHINTTSDSILLK
Shared ( 9 )
66 NVS
251 NVT 247 - 255
QVIQNVTHR
Shared ( 9 )
247 - 255
QVIQNVTHR
Shared ( 9 )
280 NES
305 NET
455 NKT
491 NAS 481 - 500
QAPKPPSPGRNASVDSHATR
Shared ( 8 )
534 NVT
641 NAT
652 NLT
674 NDT
687 NGS
694 NKS
701 NQT 696 - 723
SIQITNQTFSTVENLKPDTSYEFQVKPK
Shared ( 8 )
Brain Kidney Liver Liver: b4GalT-I(+/+) Lung Skeletal_muscle Stomach Testis
ConA RCA120 RCA120 RCA120 ConA RCA120 ConA RCA120 ConA RCA120 RCA120
 
     
         
                     
 
   
     
 
 
                     
                     
                     
     
   
       
                     
                     
                     
                     
                     
                     
                   
*1:   _:Potential Sequon     :Asn (glycosylated)     :Gln (deaminated:pyroGlu)     :Met (oxidized)     :Cys (carbamidomethylated and deaminated)

External Links

Publications

Sugahara D, Kaji H, Sugihara K, Asano M, Narimatsu H Large-scale identification of target proteins of a glycosyltransferase isozyme by Lectin-IGOT-LC/MS, an LC/MS-based glycoproteomic approach Sci Rep 2012;2(): PMID:23002422
Kaji H, Shikanai T, Sasaki-Sawa A, et al Large-scale Identification of N-Glycosylated Proteins of Mouse Tissues and Construction of a Glycoprotein Database, GlycoProtDB J Proteome Res 2012;11(9):4553-4566 PMID:22823882
Kaji H, Yamauchi Y, Takahashi N, Isobe T Mass spectrometric identification of N-linked glycopeptides using lectin-mediated affinity capture and glycosylation site--specific stable isotope tagging Nat Protocols 2007;1(6):3019-3027 PMID:17406563

Entry information

Entry version 2016-12-05
protein sequence version 2016-12-05
Entry status Latest version
Entry history

create : 2016-12-05