GlycoProtDB ID - GPDB0002607


Protein Name CD44 antigen
Protein Accession Number E9QKM8
Gene Cd44
Length 577
Status
release : 2016-12-05

Glycosylation Sites

Schema of N-glycosylation site(s) of the protein

Sequence

(__:Potential Sequon , N:Identified Site)

1
101
201
301
401
501
MDKFWWHTAW GLCLLQLSLA HPHQQIDLNV TCRYAGVFHV EKNGRYSISR TEAADLCQAF NSTLPTMDQM KLALSKGFET CRYGFIEGNV VIPRIHPNAI
CAANHTGVYI LVTSNTSHYD TYCFNASAPP EEDCTSVTDL PNSFDGPVTI TIVNRDGTRY SKKGEYRTHQ EDIDASNIID DDVSSGSTIE KSTPESYILH
TYLPTEQPTG DQDDSFFIRS TLATNIDRIS TSAHGENWTP EPQPPFNNHE YQDEEETPHA TSTTPNSTAE AAATQQETWF QNGWQGKNPP TPSEDSHVTE
GTTDTDSSHS TTLQPTAAPN THLVEDLNRT GPLSVTTPQS HSQNFSTLHG EPEEDENHPT TSILPSSTKS GAKDARRGGS LPTDTTTSVE GYTFQYPDTM
ENGTLFPVTP AKTEVFGETE VTLATDSNVN VDGSLPGDRD SSKDSRGSSR TVTHGSELAG HSSANQDSGV TTTSGPMRRP QIPEWLIILA SLLALALILA
VCIAVNSRRR CGQKKKLVIN GGNGTVEDRK PSELNGEASK SQEMVHLVNK EPSETPDQCM TADETRNLQS VDMKIGV

N-glycosylation sites

Potential sites Identified Peptide*1
Position Sequon Position Sequence Unique or Shared
29 NVT
61 NST 51 - 71
TEAADLCQAFNSTLPTMDQMK
Shared ( 24 )
51 - 71
TEAADLCQAFNSTLPTMDQMK
Shared ( 24 )
46 - 71
YSISRTEAADLCQAFNSTLPTMDQMK
Shared ( 24 )
104 NHT
115 NTS
125 NAS
237 NWT
266 NST
328 NRT
344 NFS
402 NGT
523 NGT
Colon Heart Kidney(Fut9 KO) Kidney(Fut9 WT) Liver: b4GalT-I(+/+) Liver: b4GalT-I(-/-) Serum Skeletal_muscle Stomach
Amide80 Amide80 AAL(+) AAL(+) RCA120 RCA120 Amide80 Amide80 Amide80
                 
   
         
     
   
     
                 
                 
                 
                 
                 
                 
                 
                 
                 
*1:   _:Potential Sequon     :Asn (glycosylated)     :Gln (deaminated:pyroGlu)     :Met (oxidized)     :Cys (carbamidomethylated and deaminated)

External Links

Publications

Noro E, Togayachi A, Sato T, Tomioka A, Fujita M, Sukegawa M, Suzuki N, Kaji H, Narimatsu H Large-Scale Identification of N-Glycan Glycoproteins Carrying Lewis x and Site-Specific N-Glycan Alterations in Fut9 Knockout Mice. J Proteome Res 2015;14(9):3823-34 PMID:26244810
Sugahara D, Kaji H, Sugihara K, Asano M, Narimatsu H Large-scale identification of target proteins of a glycosyltransferase isozyme by Lectin-IGOT-LC/MS, an LC/MS-based glycoproteomic approach Sci Rep 2012;2(): PMID:23002422
Kaji H, Shikanai T, Sasaki-Sawa A, et al Large-scale Identification of N-Glycosylated Proteins of Mouse Tissues and Construction of a Glycoprotein Database, GlycoProtDB J Proteome Res 2012;11(9):4553-4566 PMID:22823882

Entry information

Entry version 2016-12-05
protein sequence version 2016-12-05
Entry status Latest version
Entry history

create : 2016-12-05