GlycoProtDB ID - GPDB0002703


Protein Name CUB and sushi domain-containing protein 3 (Fragment)
Protein Accession Number F6TRD7
Gene Csmd3
Length 2797
Status
release : 2016-12-05

Glycosylation Sites

Schema of N-glycosylation site(s) of the protein

Sequence

(__:Potential Sequon , N:Identified Site)

1
101
201
301
401
501
601
701
801
901
1001
1101
1201
1301
1401
1501
1601
1701
1801
1901
2001
2101
2201
2301
2401
2501
2601
2701
XNARRFGDNF QLGSSISVIC EEGFIKTQGT ETITCILMDG KVMWSGPIPR CGAPCGGHFS APSGVILSPG WPGYYKDSLN CEWVIEAEPG HSIKITFERF
QTELNYDVLE VHDGPNLLSP LLGSYNGTQV PQFLFSSSNF IYLLFTTDNS RSNNGFKIHY ESVTVNTYSC LDPGIPVHGR RYGHDFSIGS TVSFSCDPGY
RLSHEEPLLC EKNHWWSHPL PTCDALCGGD VRGPSGTILS PGYPEFYPNS LNCTWTVDVT HGKGVQFNFH TFHLEDHHDY LLITENGSFT QPLARLTGSE
LPSTINAGLY GNFRAQLRFI SDFSISYEGF NITFSEYNLE PCEDPGIPQY GSRVGFSFGV GDTLTFSCSL GYRLEGSSEI ICLGGGRRVW SAPLPRCVAE
CGASATNNEG ILLSPNYPLN YENNHECIYS LQVQAGKGIN ISARTFHLAQ GDVLKIYDGK DKTTHLLGAF TGASMRGLTL SSTSNQLWLE FNSDSEGTDE
GFQLVYTSFE LSHCEDPGIP QFGYKISDQG HFAGSTIIYG CNPGYTLHGS SLLKCMTGER RAWDYPLPSC IAECGGRFKG ESSGRILSPG YPFPYDNNLR
CMWMIEVDPG NIVSLQFLAF DTEASHDILR VWDGPPENEM LLKEVSGSLI PDGIHSTLNI VTIQFDTDFY ISKSGFAIQF SSSVATACRD PGVPMNGTRN
GDGREPGDTV VFQCDPGYEL QGQERITCIQ VENRYFWQPS PPVCIAPCGG NLTGSSGFIL SPNFPHPYPH SRDCDWTISV NTDYVISLAF ISFSIEPNYD
FLYIYDGPDS NSPLIGSFQD SKLPERIESS SNTMHLAFRS DGSVSYTGFH LEYKAKLRES CFDPGNIMNG TRLGMDYKLG STVTYYCDAG YVLQGYSTLT
CIMGDDGRPG WNRVLPSCHA PCGSRSTGSE GTVLSPNYPK NYSVDHNCVY SIAVPKEFAV PRTSSTQCSS VPEPRFGRRI GNDFAVGSLV LFECNPGYIL
HGSRAIRCET VPNSLAQWND SLPTCIVPCG GILTKRKGTI LSPGYPEPYD NNLNCVWKIT VPEGAGIQVQ VVSFATEHNW DSLDFYDGGD NNAPRLGSYS
GTTIPHLLNS TSNNLYLNFQ SDISVSAAGF HLEYTAIGLD SCPEPQTPSS GIKVGDRYMV GDVVSFQCDQ GYSLQGHSHI TCMPGPVRRW NYPIPICLAQ
CGGAMSDFSG VILSPGFPGN YPSSLDCTWT IKLPIGFGVH LQFVNFSTET IHDYLEVRSG SSEISTVIGR LSGPQIPSSL FSTTHETSLY FHSDYSQNKQ
GFHIVYQAYQ LQSCPDPRPF RNGFVIGNDF TVGQTISFEC FPGYTLIGNS ALTCLHGVSR NWNHPLPRCE ALCGGNITAM NGTIYSPGYP DEYPNFQDCF
WLVRVPPGNG IYINFTVLQT EPIYDFITVW DGPDQNSPQI GQFSGNTALE SVYSTSNQIL IKFHSDFTTS GFFVLSYHAY QLRVCQPPPP VPNAEILTED
DEFEIGDIIR YQCLPGFTLV GNAILTCRLG ERLQMDGAPP VCQVLCPANE LRLDSTGVIL SPGYPDSYPN LQMCAWSISV EKGYNISMFV EFFQTEKEFD
VLQVYDGPNI QSPVLISLSG DYSAAFNVTS NGHEVFLQWS ADHGNNKKGF RIRYIAFYCS TPESPPHGYI ISQTGGQLNS VVRWACDRGF RLVGKSSAVC
RKSSYGYHSW DAPVPACQAI SCGIPKAPTN GGILTTDYLV GTRVTYFCND GYRLSSKELT TATCQSDGTW SNHNKTPRCV VVTCPSINSF TLDHGRWRIV
NGSHYEYKTK VVFSCDPGYH GLGPASIECL PNGTWSWRTE RPYCQIISCG ELPTPPNGNK IGTQTSYGST AIFTCDLGFM LVGSAVRECL SSGLWSGSET
RCLAGHCGIP ELIVNGQVIG ENYGYRDTVV YQCNPGFRLI GSSVRICQQD HNWSGQLPSC VPVSCGHPGS PIYGRTSGNG FNFNDVVTFS CNIGYLMQGP
TKAQCQANRQ WSHPPPVCKV VNCSDPGIPA NSKRESKIEH GNFTYGTVVF YDCNPGYFLF GSSVLICQPN GQWDKPLPEC IMIDCGHPGI PPNAVLSGEK
YTFGSTVHYS CTGKRSLLGQ ASRTCQLNGH WSGSQPHCSG DTTGTCGDPG TPGHGSRQES DFRTKSTVRF ACDTGYILYG SEERTCLSNG SWTGRQPECK
AVQCGNPGTT ANGKVFRIDG TTFSSSVIYS CLEGYILSGP SVRQCTANGT WSGSLPNCTI ISCGDPGIPA NGLRYGDDFV VGQNVSYMCQ PGYTIELNGS
RVRTCTTNGT WSGVMPTCRA VTCSTPPQIS NGRLEGTNFD WGFSISYICS AGYELSFPAV LTCVGNGTWS GEVPQCLPKF CGDPGIPSQG KREGKSFIYQ
SEVSFSCNSP FILVGSSTRL CQTDGTWSGS SPHCIEPTRT SCENPGVPRH GSQNNTFGFQ VGSVVQFHCK KGHLLQGSTT RTCLPDLTWS GIQPECIPHS
CKQPESPAHA NVVGMDLPSH GYTLIYTCQP GFFLAGGTEH RVCRSDNTWT GKVPVCEAGS KILVKDPRPA LGTPSPKLSV PDDVFAQNYI WKGSYNFKGR
KQPMTLTVTS FNASTGRVNA TLSNSDMELL LSGVYKSQEA RLMLHIYLIK VPAHASVKKM KEENWAMDGF VSAEPDGATY VFQGFIKGKD YGQFGLQRLG
LNTSEGSNSS NQPHGTNSSS VAIAILVPFF ALIFAGFGFY LYKQRTAPKT QYTGCSVHEN NNGQAAFENP MYDTNAKSVE GKAVRFDPNL NTVCTMV

N-glycosylation sites

Potential sites Identified Peptide*1
Position Sequon Position Sequence Unique or Shared
126 NGT
252 NCT
286 NGS
331 NIT
440 NIS
696 NGT
751 NLT
869 NGT
941 NYS
1019 NDS
1109 NST
1245 NFS
1376 NIT
1381 NGT
1414 NFT
1585 NIS
1627 NVT
1774 NKT
1801 NGS 1799 - 1808
IVNGSHYEYK
Shared ( 3 )
1832 NGT
1952 NWS
2022 NCS
2042 NFT
2189 NGS 2185 - 2195
TCLSNGSWTGR
Shared ( 4 )
2248 NGT
2257 NCT
2284 NVS
2298 NGS
2308 NGT
2366 NGT
2454 NNT
2612 NAS 2601 - 2617
KQPMTLTVTSFNASTGR
Shared ( 5 )
2619 NAT
2702 NTS
2708 NSS
2717 NSS
Brain
ConA
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
*1:   _:Potential Sequon     :Asn (glycosylated)     :Gln (deaminated:pyroGlu)     :Met (oxidized)     :Cys (carbamidomethylated and deaminated)

External Links

Publications

Kaji H, Shikanai T, Sasaki-Sawa A, et al Large-scale Identification of N-Glycosylated Proteins of Mouse Tissues and Construction of a Glycoprotein Database, GlycoProtDB J Proteome Res 2012;11(9):4553-4566 PMID:22823882
Kaji H, Yamauchi Y, Takahashi N, Isobe T Mass spectrometric identification of N-linked glycopeptides using lectin-mediated affinity capture and glycosylation site--specific stable isotope tagging Nat Protocols 2007;1(6):3019-3027 PMID:17406563

Entry information

Entry version 2016-12-05
protein sequence version 2016-12-05
Entry status Latest version
Entry history

create : 2016-12-05