GlycoProtDB ID - GPDB0003164


Protein Name Basigin (Fragment)
Protein Accession Number O55107
Gene Bsg
Length 275
Status
release : 2016-12-05

Glycosylation Sites

Schema of N-glycosylation site(s) of the protein

Sequence

(__:Potential Sequon , N:Identified Site)

1
101
201
FQQQTSQSGA DYYAELILFL PVASAGTIQT SVQEVNSKTQ LTCSLNSSGV DIVGHRWMRG GKVLQEDTLP DLHTKYIVDA DDRSGEYSCI FLPEPVGRSE
INVEGPPRIK VGKKSEHSSE GELAKLVCKS DASYPPITDW FWFKTSDTGE EEAITNSTEA NGKYVVVSTP EKSQLTISNL DVNVDPGTYV CNATNAQGTT
RETISLRVRS RMAALWPFLG IVAEVLVLVT IIFIYEKRRK PDQTLDEDDP GAAPLKGSGT HMNDKDKNVR QRNAT

N-glycosylation sites

Potential sites Identified Peptide*1
Position Sequon Position Sequence Unique or Shared
46 NSS 44 - 56
SLNSSGVDIVGHR
Shared ( 5 )
39 - 59
TQLTCSLNSSGVDIVGHRWMR
Shared ( 5 )
43 - 56
CSLNSSGVDIVGHR
Shared ( 5 )
39 - 59
TQLTCSLNSSGVDIVGHRWMR
Shared ( 5 )
39 - 56
TQLTCSLNSSGVDIVGHR
Shared ( 5 )
156 NST 145 - 163
TSDTGEEEAITNSTEANGK
Shared ( 6 )
192 NAT 173 - 201
SQLTISNLDVNVDPGTYVCNATNAQGTTR
Shared ( 5 )
173 - 207
SQLTISNLDVNVDPGTYVCNATNAQGTTRETISLR
Shared ( 5 )
273 NAT
Brain Colon Heart Kidney Kidney(Fut9 KO) Kidney(Fut9 WT) Liver Liver: b4GalT-I(+/+) Liver: b4GalT-I(-/-) Lung Skeletal_muscle Stomach Testis
AAL ConA RCA120 Amide80 ConA RCA120 Amide80 ConA RCA120 AAL ConA RCA120 AAL(+) AAL(+) AAL ConA RCA120 SSA WGA RCA120 RCA120 AAL ConA RCA120 Amide80 ConA RCA120 Amide80 ConA RCA120 AAL ConA RCA120
                       
                                     
     
                                                         
                       
                                     
     
   
 
                                               
     
       
         
       
       
           
         
         
                       
     
                                                 
     
                                                                 
*1:   _:Potential Sequon     :Asn (glycosylated)     :Gln (deaminated:pyroGlu)     :Met (oxidized)     :Cys (carbamidomethylated and deaminated)

External Links

Publications

Noro E, Togayachi A, Sato T, Tomioka A, Fujita M, Sukegawa M, Suzuki N, Kaji H, Narimatsu H Large-Scale Identification of N-Glycan Glycoproteins Carrying Lewis x and Site-Specific N-Glycan Alterations in Fut9 Knockout Mice. J Proteome Res 2015;14(9):3823-34 PMID:26244810
Sugahara D, Kaji H, Sugihara K, Asano M, Narimatsu H Large-scale identification of target proteins of a glycosyltransferase isozyme by Lectin-IGOT-LC/MS, an LC/MS-based glycoproteomic approach Sci Rep 2012;2(): PMID:23002422
Kaji H, Shikanai T, Sasaki-Sawa A, et al Large-scale Identification of N-Glycosylated Proteins of Mouse Tissues and Construction of a Glycoprotein Database, GlycoProtDB J Proteome Res 2012;11(9):4553-4566 PMID:22823882
Kaji H, Yamauchi Y, Takahashi N, Isobe T Mass spectrometric identification of N-linked glycopeptides using lectin-mediated affinity capture and glycosylation site--specific stable isotope tagging Nat Protocols 2007;1(6):3019-3027 PMID:17406563

Entry information

Entry version 2016-12-05
protein sequence version 2016-12-05
Entry status Latest version
Entry history

create : 2016-12-05