GlycoProtDB ID - GPDB0003195


Protein Name BH-protocadherin-a
Protein Accession Number O88185
Gene Pcdh7
Length 1069
Status
release : 2016-12-05

Glycosylation Sites

Schema of N-glycosylation site(s) of the protein

Sequence

(__:Potential Sequon , N:Identified Site)

1
101
201
301
401
501
601
701
801
901
1001
MLRMRTTGWA RGWCLGCCLL LPLCFSLAAA KQLLRYRLAE EGPADVRIGN VASDLGIVTG SGEVTFSLES GSEYLKIDNL TGELSTSERR IDREKLPQCQ
MIFDENECFL DFEVSVIGPS QSWVDLFEGR VIVLDINDNT PTFPSPVLTL TVEENRPVGT LYLLPTATDR DFGRNGIERY ELLQEPGGGG GSGEGRRLGP
ADSAPYPGGG GNSASGGGSG GSKRRLDAPE GGGGTSPSGR SSVFELQVAD TPDGEKQPQL IVKGALDREQ RDSYELTLRV RDGGDPPRSS QAILRVLITD
VNDNSPRFEK SVYEADLAEN SAPGTPILQL RATDLDVGVN GQIEYVFGAA TESVRRLLRL DETSGWLSVL HRIDREEVNQ LRFTVMARDR GQPPKTDKAT
VVFNIKDEND NVPSIEIRKI GRIPLKDGVA NVAEDVLVDT PIALVQVSDR DQGENGVVTC TVVGDVPFQL KPASDTEGDQ NKKKYFLHTS APLDYETTRE
FNVVIVAVDS GSPSLSSNNS LVVKVGDTND NPPVFGQSVV EVYFPENNIP GERVATVLAT DADSGKNAEI AYSLDSSVMG TFAIDPDSGD ILVNTVLDRE
QTDRYEFKVN AKDKGIPVLQ GSTTVIVQVA DKNDNDPKFM QDVFTFYVKE NLQPNSPVGM VTVMDADKGR NAEMSLYIEE NSNIFSIEND TGTIYSTMSF
DREHQTTYTF RVKAVDGGDP PRSATATVSL FVMDENDNAP TVTLPRNISY TLLPPSSNVR TVVATVLATD SDDGINADLN YSIVGGNPFK LFEIDSTSGV
VSLVGKLTQK HYGLHRLVVQ VNDSGQPSQS TTTLVHVFVN ESVSNATVID SQIVRSLHTP LTQDIAGHPS YEISKQRLSI VIGVVAGIMT VILIILIVMM
ARYCRSKNKN GYEAGKKDHE DFFTPQQHDK SKKPKKDKKN KKSKQPLYSS IVTVEASKPN GQRYDSVNEK LSDSPSMGRY RSVNGGPGSP DLARHYKSSS
PLPTVQLHPQ SPTAGKKHQA VQDLPPANTF VGAGDNISIG SDHCSEYSCQ TSNKYSKQMR VHPYITVFG

N-glycosylation sites

Potential sites Identified Peptide*1
Position Sequon Position Sequence Unique or Shared
79 NLT
106 NEC
518 NNS
689 NDT
747 NIS
780 NYS
822 NDS 817 - 855
LVVQVNDSGQPSQSTTTLVHVFVNESVSNATVIDSQIVR
Shared ( 8 )
840 NES 817 - 855
LVVQVNDSGQPSQSTTTLVHVFVNESVSNATVIDSQIVR
Shared ( 8 )
845 NAT 817 - 855
LVVQVNDSGQPSQSTTTLVHVFVNESVSNATVIDSQIVR
Shared ( 8 )
1036 NIS
Brain Heart Stomach
ConA Amide80 ConA ConA
       
       
       
       
       
       
       
*1:   _:Potential Sequon     :Asn (glycosylated)     :Gln (deaminated:pyroGlu)     :Met (oxidized)     :Cys (carbamidomethylated and deaminated)

External Links

Publications

Kaji H, Shikanai T, Sasaki-Sawa A, et al Large-scale Identification of N-Glycosylated Proteins of Mouse Tissues and Construction of a Glycoprotein Database, GlycoProtDB J Proteome Res 2012;11(9):4553-4566 PMID:22823882
Kaji H, Yamauchi Y, Takahashi N, Isobe T Mass spectrometric identification of N-linked glycopeptides using lectin-mediated affinity capture and glycosylation site--specific stable isotope tagging Nat Protocols 2007;1(6):3019-3027 PMID:17406563

Entry information

Entry version 2016-12-05
protein sequence version 2016-12-05
Entry status Latest version
Entry history

create : 2016-12-05