GlycoProtDB ID - GPDB0003314


Protein Name C4b-binding protein
Protein Accession Number P08607
Gene C4bpa
Length 469
Status
Reviewed
release : 2016-12-05

Glycosylation Sites

Schema of N-glycosylation site(s) of the protein

Sequence

(__:Potential Sequon , N:Identified Site)

1
101
201
301
401
MCAKQQQTLL PTRAAHGRLH RNRDAVAWPF STLCRVSGPT LFQMTFTAAL WVAVFGKCGP PPAIPNALPA SDVNRTDFES HTTLKYECLP GYGRGISRMM
VYCKPSGEWE ISVSCAKKHC RNPGYLDNGY VNGETITFGS QIEFSCQEGF ILVGSSTSSC EVRGKGVAWS NPFPECVIVK CGPPPDISNG KHSGTEDFYP
YNHGISYTCD PGFRLVGSPF IGCTVVNKTV PVWSSSPPTC EKIICSQPNI LHGVIVSGYK ATYTHRDSVR LACLNGTVLR GRHVIECQGN GNWSSLPTCE
FDCDLPPAIV NGYYTSMVYS KITLVTYECD KGYRLVGKAI ISCSFSKWKG TAPQCKALCQ KPEVGNGTLS DEKDQYVESE NVTIQCDSGF AMLGSQSISC
SESGTWYPEV PRCEQEASED LKPALTGNKT MQYVPNSHDV KMALEIYKLT LEVELLQLQI QKEKHTEAH

N-glycosylation sites

Potential sites Identified Peptide*1
Position Sequon Position Sequence Unique or Shared
74 NRT 58 - 85
CGPPPAIPNALPASDVNRTDFESHTTLK
Shared ( 4 )
227 NKT 215 - 228
LVGSPFIGCTVVNK
Shared ( 5 )
215 - 242
LVGSPFIGCTVVNKTVPVWSSSPPTCEK
Shared ( 5 )
275 NGT 271 - 280
LACLNGTVLR
Shared ( 4 )
292 NWS
366 NGT 357 - 373
ALCQKPEVGNGTLSDEK
Shared ( 4 )
362 - 373
PEVGNGTLSDEK
Shared ( 4 )
381 NVT
428 NKT 413 - 429
CEQEASEDLKPALTGNK
Shared ( 3 )
413 - 441
CEQEASEDLKPALTGNKTMQYVPNSHDVK
Shared ( 3 )
413 - 441
CEQEASEDLKPALTGNKTMQYVPNSHDVK
Shared ( 3 )
Brain Colon Heart Kidney Kidney(Fut9 KO) Kidney(Fut9 WT) Liver Liver: b4GalT-I(+/+) Liver: b4GalT-I(-/-) Lung Serum Skeletal_muscle Stomach Testis
RCA120 RCA120 Amide80 ConA RCA120 RCA120 AAL(+) AAL(+) AAL ConA RCA120 SSA WGA RCA120 RCA120 RCA120 Amide80 RCA120 RCA120 AAL ConA RCA120
           
                           
 
   
   
                               
         
     
 
 
   
                                           
 
 
 
         
   
     
             
                           
                                           
           
   
         
         
                               
         
                               
         
*1:   _:Potential Sequon     :Asn (glycosylated)     :Gln (deaminated:pyroGlu)     :Met (oxidized)     :Cys (carbamidomethylated and deaminated)

External Links

GeneID InterPro KEGG MGI PIR PROSITE Pfam PhosphoSitePlus RefSeq UCSC

12269

IPR000436

mmu:12269

MGI:88229

A27117

PS50923

PF00084

P08607

NP_031602.3

XP_011246208.1

uc007cmc.1

Publications

Noro E, Togayachi A, Sato T, Tomioka A, Fujita M, Sukegawa M, Suzuki N, Kaji H, Narimatsu H Large-Scale Identification of N-Glycan Glycoproteins Carrying Lewis x and Site-Specific N-Glycan Alterations in Fut9 Knockout Mice. J Proteome Res 2015;14(9):3823-34 PMID:26244810
Sugahara D, Kaji H, Sugihara K, Asano M, Narimatsu H Large-scale identification of target proteins of a glycosyltransferase isozyme by Lectin-IGOT-LC/MS, an LC/MS-based glycoproteomic approach Sci Rep 2012;2(): PMID:23002422
Kaji H, Shikanai T, Sasaki-Sawa A, et al Large-scale Identification of N-Glycosylated Proteins of Mouse Tissues and Construction of a Glycoprotein Database, GlycoProtDB J Proteome Res 2012;11(9):4553-4566 PMID:22823882
Kaji H, Yamauchi Y, Takahashi N, Isobe T Mass spectrometric identification of N-linked glycopeptides using lectin-mediated affinity capture and glycosylation site--specific stable isotope tagging Nat Protocols 2007;1(6):3019-3027 PMID:17406563

Entry information

Entry version 2016-12-05
protein sequence version 2016-12-05
Entry status Latest version
Entry history

create : 2016-12-05