GlycoProtDB ID - GPDB0003454


Protein Name Basigin
Protein Accession Number P18572
Gene Bsg
Length 389
Status
Reviewed
release : 2016-12-05

Glycosylation Sites

Schema of N-glycosylation site(s) of the protein

Sequence

(__:Potential Sequon , N:Identified Site)

1
101
201
301
MAAALLLALA FTLLSGQGAC AAAGFLKAPL SQERWAGGSV VLHCEAVGSP IPEIQWWFEG NAPNDSCSQL WDGARLDRVH IHAAYRQHAA SSLSVDGLTA
EDTGTYECRA SSDPDRNHLT RPPRVKWVRA QASVVVLEPG TIQTSVQEVN SKTQLTCSLN SSGVDIVGHR WMRGGKVLQE DTLPDLHTKY IVDADDRSGE
YSCIFLPEPV GRSEINVEGP PRIKVGKKSE HSSEGELAKL VCKSDASYPP ITDWFWFKTS DTGEEEAITN STEANGKYVV VSTPEKSQLT ISNLDVNVDP
GTYVCNATNA QGTTRETISL RVRSRMAALW PFLGIVAEVL VLVTIIFIYE KRRKPDQTLD EDDPGAAPLK GSGTHMNDKD KNVRQRNAT

N-glycosylation sites

Potential sites Identified Peptide*1
Position Sequon Position Sequence Unique or Shared
64 NDS
160 NSS 158 - 170
SLNSSGVDIVGHR
Shared ( 5 )
153 - 173
TQLTCSLNSSGVDIVGHRWMR
Shared ( 5 )
157 - 170
CSLNSSGVDIVGHR
Shared ( 5 )
153 - 173
TQLTCSLNSSGVDIVGHRWMR
Shared ( 5 )
153 - 170
TQLTCSLNSSGVDIVGHR
Shared ( 5 )
270 NST 259 - 277
TSDTGEEEAITNSTEANGK
Shared ( 6 )
306 NAT 287 - 315
SQLTISNLDVNVDPGTYVCNATNAQGTTR
Shared ( 5 )
287 - 321
SQLTISNLDVNVDPGTYVCNATNAQGTTRETISLR
Shared ( 5 )
387 NAT
Brain Colon Heart Kidney Kidney(Fut9 KO) Kidney(Fut9 WT) Liver Liver: b4GalT-I(+/+) Liver: b4GalT-I(-/-) Lung Skeletal_muscle Stomach Testis
AAL ConA RCA120 Amide80 ConA RCA120 Amide80 ConA RCA120 AAL ConA RCA120 AAL(+) AAL(+) AAL ConA RCA120 SSA WGA RCA120 RCA120 AAL ConA RCA120 Amide80 ConA RCA120 Amide80 ConA RCA120 AAL ConA RCA120
                                                                 
                       
                                     
     
                                                         
                       
                                     
     
   
 
                                               
     
       
         
       
       
           
         
         
                       
     
                                                 
     
                                                                 
*1:   _:Potential Sequon     :Asn (glycosylated)     :Gln (deaminated:pyroGlu)     :Met (oxidized)     :Cys (carbamidomethylated and deaminated)

External Links

Publications

Noro E, Togayachi A, Sato T, Tomioka A, Fujita M, Sukegawa M, Suzuki N, Kaji H, Narimatsu H Large-Scale Identification of N-Glycan Glycoproteins Carrying Lewis x and Site-Specific N-Glycan Alterations in Fut9 Knockout Mice. J Proteome Res 2015;14(9):3823-34 PMID:26244810
Sugahara D, Kaji H, Sugihara K, Asano M, Narimatsu H Large-scale identification of target proteins of a glycosyltransferase isozyme by Lectin-IGOT-LC/MS, an LC/MS-based glycoproteomic approach Sci Rep 2012;2(): PMID:23002422
Kaji H, Shikanai T, Sasaki-Sawa A, et al Large-scale Identification of N-Glycosylated Proteins of Mouse Tissues and Construction of a Glycoprotein Database, GlycoProtDB J Proteome Res 2012;11(9):4553-4566 PMID:22823882
Kaji H, Yamauchi Y, Takahashi N, Isobe T Mass spectrometric identification of N-linked glycopeptides using lectin-mediated affinity capture and glycosylation site--specific stable isotope tagging Nat Protocols 2007;1(6):3019-3027 PMID:17406563

Entry information

Entry version 2016-12-05
protein sequence version 2016-12-05
Entry status Latest version
Entry history

create : 2016-12-05