GlycoProtDB ID - GPDB0005412


Protein Name Alpha-1 type I procollagen (Fragment)
Protein Accession Number Q60785
Gene Col1a1
Length 325
Status
release : 2016-12-05

Glycosylation Sites

Schema of N-glycosylation site(s) of the protein

Sequence

(__:Potential Sequon , N:Identified Site)

1
101
201
301
PRGPPGSAGS PGKDGLNGLP GPIGPPGPRG RTGDSGPAGT PGPPGPPGPP GPPSGGYDFS FLPQPPQEKS QDGDRYYRAD DANVVRDRDL AVDATLKSLS
QQIENIRSPX SSRKNPARTC RDLKMCHSDW KSGEYWIDPN QGCNLDAIKV YCNMETGQTC VFPTQPSVPQ KNWYISPNPK EKKHVWFGES MTDGFPFEYG
SEGSDPTDVA IQLTFLRLMS TEASQNITYH CKNSVAYMDQ QTGNLKKALL LQGSNEIELR GEGNSRFTYS RVVDGCTSHT GTWGKTVIEY KTTKTSRLPI
IDVAPLDIGA PDQEFGLDIG PXCFV

N-glycosylation sites

Potential sites Identified Peptide*1
Position Sequon Position Sequence Unique or Shared
226 NIT 218 - 232
LMSTEASQNITYHCK
Shared ( 4 )
218 - 232
LMSTEASQNITYHCK
Shared ( 4 )
Colon Kidney Liver Lung Serum Skeletal_muscle Stomach Testis
Amide80 ConA RCA120 ConA ConA ConA Amide80 Amide80 ConA ConA ConA
   
 
 
 
*1:   _:Potential Sequon     :Asn (glycosylated)     :Gln (deaminated:pyroGlu)     :Met (oxidized)     :Cys (carbamidomethylated and deaminated)

External Links

Publications

Kaji H, Shikanai T, Sasaki-Sawa A, et al Large-scale Identification of N-Glycosylated Proteins of Mouse Tissues and Construction of a Glycoprotein Database, GlycoProtDB J Proteome Res 2012;11(9):4553-4566 PMID:22823882
Kaji H, Yamauchi Y, Takahashi N, Isobe T Mass spectrometric identification of N-linked glycopeptides using lectin-mediated affinity capture and glycosylation site--specific stable isotope tagging Nat Protocols 2007;1(6):3019-3027 PMID:17406563

Entry information

Entry version 2016-12-05
protein sequence version 2016-12-05
Entry status Latest version
Entry history

create : 2016-12-05