GlycoProtDB ID - GPDB0005582


Protein Name CD180 antigen
Protein Accession Number Q62192
Gene Cd180
Length 661
Status
Reviewed
release : 2016-12-05

Glycosylation Sites

Schema of N-glycosylation site(s) of the protein

Sequence

(__:Potential Sequon , N:Identified Site)

1
101
201
301
401
501
601
MAPDISCFFL VALFLASCRA TTSSDQKCIE KEVNKTYNCE NLGLNEIPGT LPNSTECLEF SFNVLPTIQN TTFSRLINLT FLDLTRCQIY WIHEDTFQSQ
HRLDTLVLTA NPLIFMAETA LSGPKALKHL FFIQTGISSI DFIPLHNQKT LESLYLGSNH ISSIKLPKGF PTEKLKVLDF QNNAIHYLSK EDMSSLQQAT
NLSLNLNGND IAGIELGAFD SAVFQSLNFG GTQNLLVIFK GLKNSTIQSL WLGTFEDMDD EDISPAVFEG LCEMSVESIN LQKHYFFNIS SNTFHCFSGL
QELDLTATHL SELPSGLVGL STLKKLVLSA NKFENLCQIS ASNFPSLTHL SIKGNTKRLE LGTGCLENLE NLRELDLSHD DIETSDCCNL QLRNLSHLQS
LNLSYNEPLS LKTEAFKECP QLELLDLAFT RLKVKDAQSP FQNLHLLKVL NLSHSLLDIS SEQLFDGLPA LQHLNLQGNH FPKGNIQKTN SLQTLGRLEI
LVLSFCDLSS IDQHAFTSLK MMNHVDLSHN RLTSSSIEAL SHLKGIYLNL ASNRISIILP SLLPILSQQR TINLRQNPLD CTCSNIYFLE WYKENMQKLE
DTEDTLCENP PLLRGVRLSD VTLSCSMAAV GIFFLIVFLL VFAILLIFAV KYFLRWKYQH I

N-glycosylation sites

Potential sites Identified Peptide*1
Position Sequon Position Sequence Unique or Shared
34 NKT
53 NST
70 NTT
78 NLT 76 - 86
LINLTFLDLTR
Shared ( 4 )
201 NLS
244 NST
288 NIS
335 NLC
394 NLS
402 NLS
451 NLS
Liver: b4GalT-I(-/-)
RCA120
 
 
 
 
 
 
 
 
 
 
*1:   _:Potential Sequon     :Asn (glycosylated)     :Gln (deaminated:pyroGlu)     :Met (oxidized)     :Cys (carbamidomethylated and deaminated)

External Links

Publications

Sugahara D, Kaji H, Sugihara K, Asano M, Narimatsu H Large-scale identification of target proteins of a glycosyltransferase isozyme by Lectin-IGOT-LC/MS, an LC/MS-based glycoproteomic approach Sci Rep 2012;2(): PMID:23002422

Entry information

Entry version 2016-12-05
protein sequence version 2016-12-05
Entry status Latest version
Entry history

create : 2016-12-05