GlycoProtDB ID - GPDB0006059


Protein Name 2010209O12Rik protein
Protein Accession Number Q80VD4
Gene Chpf2
Length 492
Status
release : 2016-12-05

Glycosylation Sites

Schema of N-glycosylation site(s) of the protein

Sequence

(__:Potential Sequon , N:Identified Site)

1
101
201
301
401
MRLSSLLALL RPVLPLILGL SLGCSLSLLR VSWIQGEGED PCVEAVGKPG GPQNPDSKNG LDQGDEDFRP RIVPYYRDPN KPYKKVLRTR YIQTELGSRE
RLLVAVLTSR ATLSTLAVAV NRTVAHHFPR LLYFTEQLNR RYQPRLRFRK QRLLNGYRRF DPARGMEYTL DLLLEAVTQR GHRRSLARRV SLLRPLSRVE
ILPMPYVTEA TRVQLVLPLL VAEAPAALAF LEAFAASVLE PREHALLTLL LVYGPREGRG GPDPFLGVKA AAAELERRYP GARLAWLAVR AEAPSQVRLM
DVISKKHPVD TLFFLTTVWT RPGSEVLNRC RMNAISGWQA FFPVHFQEFN PALSPQRSPP GVPGADPPSP GVDPSRGAPV GGRFDRQASA EGCFYNADYL
AARARLAGEL AGQEEEEALE GLEVMDVFLR FSGLHLFRAV EPGLVQKFSL RDCSPRLSEE LYHRCRLSNL EGLGARTQLA MALFEQEQAN ST

N-glycosylation sites

Potential sites Identified Peptide*1
Position Sequon Position Sequence Unique or Shared
121 NRT 111 - 122
ATLSTLAVAVNR
Shared ( 4 )
328 NRC
490 NST
Liver
ConA
 
 
*1:   _:Potential Sequon     :Asn (glycosylated)     :Gln (deaminated:pyroGlu)     :Met (oxidized)     :Cys (carbamidomethylated and deaminated)

External Links

Publications

Kaji H, Shikanai T, Sasaki-Sawa A, et al Large-scale Identification of N-Glycosylated Proteins of Mouse Tissues and Construction of a Glycoprotein Database, GlycoProtDB J Proteome Res 2012;11(9):4553-4566 PMID:22823882
Kaji H, Yamauchi Y, Takahashi N, Isobe T Mass spectrometric identification of N-linked glycopeptides using lectin-mediated affinity capture and glycosylation site--specific stable isotope tagging Nat Protocols 2007;1(6):3019-3027 PMID:17406563

Entry information

Entry version 2016-12-05
protein sequence version 2016-12-05
Entry status Latest version
Entry history

create : 2016-12-05