GlycoProtDB ID - GPDB0006321


Protein Name C-type lectin domain family 4 member G
Protein Accession Number Q8BNX1
Gene Clec4g
Length 294
Status
Reviewed
release : 2016-12-05

Glycosylation Sites

Schema of N-glycosylation site(s) of the protein

Sequence

(__:Potential Sequon , N:Identified Site)

1
101
201
MNTGEYNKLG SAIEEVSRGQ LGRWECYKQR LFFLVLALLV ATVLWALILS TLLSSASSKL RVLLSHQDLL RTNASEQKMT LSSLKDDIGA CRNCCSVTKA
QLQTTLAEFK DIQAKLMEQE SILKELQERV TQDLAKASRD RENIRSELFQ ALEAVKRQNS SCEQCPPSWL PFQGSCYYFS ETQATWDTAQ SYCGGQGAHL
VIVRGLNEQG FLSQHTRGRG YWLGLRAVRH LNKIQGYRWV DGASLNFSHW NSGEPNDSRG HEDCIMMLHS GLWNDAPCTN ERDGWICEKR SSCY

N-glycosylation sites

Potential sites Identified Peptide*1
Position Sequon Position Sequence Unique or Shared
73 NAS 62 - 78
VLLSHQDLLRTNASEQK
Unique
93 NCC 86 - 99
DDIGACRNCCSVTK
Unique
159 NSS
246 NFS 239 - 259
WVDGASLNFSHWNSGEPNDSR
Unique
256 NDS
Liver Liver: b4GalT-I(+/+) Liver: b4GalT-I(-/-)
AAL RCA120 RCA120
 
 
 
     
   
     
*1:   _:Potential Sequon     :Asn (glycosylated)     :Gln (deaminated:pyroGlu)     :Met (oxidized)     :Cys (carbamidomethylated and deaminated)

External Links

Publications

Sugahara D, Kaji H, Sugihara K, Asano M, Narimatsu H Large-scale identification of target proteins of a glycosyltransferase isozyme by Lectin-IGOT-LC/MS, an LC/MS-based glycoproteomic approach Sci Rep 2012;2(): PMID:23002422
Kaji H, Shikanai T, Sasaki-Sawa A, et al Large-scale Identification of N-Glycosylated Proteins of Mouse Tissues and Construction of a Glycoprotein Database, GlycoProtDB J Proteome Res 2012;11(9):4553-4566 PMID:22823882
Kaji H, Yamauchi Y, Takahashi N, Isobe T Mass spectrometric identification of N-linked glycopeptides using lectin-mediated affinity capture and glycosylation site--specific stable isotope tagging Nat Protocols 2007;1(6):3019-3027 PMID:17406563

Entry information

Entry version 2016-12-05
protein sequence version 2016-12-05
Entry status Latest version
Entry history

create : 2016-12-05