GlycoProtDB ID - GPDB0006817


Protein Name 4732418C07Rik protein (Fragment)
Protein Accession Number Q8R053
Gene Efcab14
Length 315
Status
release : 2016-12-05

Glycosylation Sites

Schema of N-glycosylation site(s) of the protein

Sequence

(__:Potential Sequon , N:Identified Site)

1
101
201
301
LKASVKSAAD LLSLPSTVEG LQKSVASIGN TLNSVHLAVE VIQKTVDEHR TTLGLLQGSM ENNGSNQILP SPSPPSELDN KSHSESAKQD ILYLHNSLEE
VNSTVVEYQR QNDLKLKGMS ETLSNLTQRL SLIESHVVAL SKAEQRTNVS SSTMENRAAT LKRESLVTNR SDTVQAQSMK KEDNSNSQVS ELREKLQLIS
ALTNKPESNR PPETTDEEQV QNFTSDPSAL PEFSQLLRNQ IETQVKPLSL PGISSIKDLQ DLFHKTGQDV DGMLTYQELW NSLGSAMPRP ESLRAFDSNG
DGRYSFLELR LALGI

N-glycosylation sites

Potential sites Identified Peptide*1
Position Sequon Position Sequence Unique or Shared
63 NGS
80 NKS
102 NST
125 NLT 118 - 129
GMSETLSNLTQR
Shared ( 5 )
118 - 129
GMSETLSNLTQR
Shared ( 5 )
148 NVS 143 - 157
AEQRTNVSSSTMENR
Shared ( 5 )
169 NRS 163 - 180
RESLVTNRSDTVQAQSMK
Shared ( 6 )
222 NFT
Brain Colon Heart Liver: b4GalT-I(+/+) Skeletal_muscle Stomach Testis
ConA Amide80 Amide80 ConA RCA120 ConA Amide80 ConA ConA RCA120
                   
                   
                   
     
         
       
   
 
     
     
 
 
 
   
                   
*1:   _:Potential Sequon     :Asn (glycosylated)     :Gln (deaminated:pyroGlu)     :Met (oxidized)     :Cys (carbamidomethylated and deaminated)

External Links

Publications

Sugahara D, Kaji H, Sugihara K, Asano M, Narimatsu H Large-scale identification of target proteins of a glycosyltransferase isozyme by Lectin-IGOT-LC/MS, an LC/MS-based glycoproteomic approach Sci Rep 2012;2(): PMID:23002422
Kaji H, Shikanai T, Sasaki-Sawa A, et al Large-scale Identification of N-Glycosylated Proteins of Mouse Tissues and Construction of a Glycoprotein Database, GlycoProtDB J Proteome Res 2012;11(9):4553-4566 PMID:22823882
Kaji H, Yamauchi Y, Takahashi N, Isobe T Mass spectrometric identification of N-linked glycopeptides using lectin-mediated affinity capture and glycosylation site--specific stable isotope tagging Nat Protocols 2007;1(6):3019-3027 PMID:17406563

Entry information

Entry version 2016-12-05
protein sequence version 2016-12-05
Entry status Latest version
Entry history

create : 2016-12-05