GlycoProtDB ID - GPDB0007816


Protein Name C4 protein ( Slp hypridprotein ) (Fragment)
Protein Accession Number Q9Z0D8
Gene C4
Length 535
Status
release : 2016-12-05

Glycosylation Sites

Schema of N-glycosylation site(s) of the protein

Sequence

(__:Potential Sequon , N:Identified Site)

1
101
201
301
401
501
MRLLWGLAWV FSFCASSLQK PRLLLFSPSV VNLGTPLSVG VQLLDAPPGQ EVKGSVFLRN PKGGSCSPKK DFKLSSGDDF VLLSLEVPLE DVRSCGLFDL
RRAPHIQLVA QSPWLRNTAF KATETQGVNL LFSSRRGHIF VQTDQPIYNP GQRVRYRVFA LDQKMRPSTD FLTITVENSH GLRVLKKEIF TSTSIFQDAF
TIPDISEPGT WKISARFSDG LESNRSTHFE VKKYVLPNFE VKITPWKPYI LMVPSNSDEI QLDIQARYIY GKPVQGVAYT RFALMDEQGK RTFLRGLETQ
AKLVEGRTHI SISKDQFQAA LDKINIGVRD LEGLRLYAAT AVIESPGGEM EEAELTSWRF VSSAFSLDLS RTKRHLVPGA HFLLQALVRE ISGSEASNVI
VKVSATLVSG SDSQVLNVQQ STNRIGQVSI SFPIPPTVTG LRLLVSAGSL YPMIARLTVQ SPPSRGTGFL SIEPLDPRSP RVGDTFILNL QAVGIPAPTF
SHYYYMIISR GQIMAMSREA RRTVTSVSVL VDHQL

N-glycosylation sites

Potential sites Identified Peptide*1
Position Sequon Position Sequence Unique or Shared
224 NRS 217 - 232
FSDGLESNRSTHFEVK
Shared ( 14 )
217 - 225
FSDGLESNR
Shared ( 14 )
217 - 233
FSDGLESNRSTHFEVKK
Shared ( 12 )
Brain Colon Heart Kidney Liver Liver: b4GalT-I(-/-) Lung Serum Skeletal_muscle Stomach Testis
ConA ConA RCA120 Amide80 ConA ConA ConA RCA120 ConA Amide80 ConA ConA ConA
 
       
 
     
       
       
   
*1:   _:Potential Sequon     :Asn (glycosylated)     :Gln (deaminated:pyroGlu)     :Met (oxidized)     :Cys (carbamidomethylated and deaminated)

External Links

Publications

Sugahara D, Kaji H, Sugihara K, Asano M, Narimatsu H Large-scale identification of target proteins of a glycosyltransferase isozyme by Lectin-IGOT-LC/MS, an LC/MS-based glycoproteomic approach Sci Rep 2012;2(): PMID:23002422
Kaji H, Shikanai T, Sasaki-Sawa A, et al Large-scale Identification of N-Glycosylated Proteins of Mouse Tissues and Construction of a Glycoprotein Database, GlycoProtDB J Proteome Res 2012;11(9):4553-4566 PMID:22823882
Kaji H, Yamauchi Y, Takahashi N, Isobe T Mass spectrometric identification of N-linked glycopeptides using lectin-mediated affinity capture and glycosylation site--specific stable isotope tagging Nat Protocols 2007;1(6):3019-3027 PMID:17406563

Entry information

Entry version 2016-12-05
protein sequence version 2016-12-05
Entry status Latest version
Entry history

create : 2016-12-05