GlycoProtDB ID - GPDB0003318

Protein Name Integrin beta-1
Protein Accession Number P09055
Gene Itgb1
Length 798
Status
release : 2025-10-17

Glycosylation Sites
Schema of N-glycosylation site(s) of the protein

Sequence

(__:Potential Sequon , N:Identified Site)

1
101
201
301
401
501
601
701
MNLQLVSWIG LISLICSVFG QTDKNRCLKA NAKSCGECIQ AGPNCGWCTN TTFLQEGMPT SARCDDLEAL KKKGCQPSDI ENPRGSQTIK KNKNVTNRSK
GMAEKLRPED ITQIQPQQLL LKLRSGEPQK FTLKFKRAED YPIDLYYLMD LSYSMKDDLE NVKSLGTDLM NEMRRITSDF RIGFGSFVEK TVMPYISTTP
AKLRNPCTSE QNCTSPFSYK NVLSLTDRGE FFNELVGQQR ISGNLDSPEG GFDAIMQVAV CGSLIGWRNV TRLLVFSTDA GFHFAGDGKL GGIVLPNDGQ
CHLENNVYTM SHYYDYPSIA HLVQKLSENN IQTIFAVTEE FQPVYKELKN LIPKSAVGTL SGNSSNVIQL IIDAYNSLSS EVILENSKLP DGVTINYKSY
CKNGVNGTGE NGRKCSNISI GDEVQFEISI TANKCPNKES ETIKIKPLGF TEEVEVVLQF ICKCNCQSHG IPASPKCHEG NGTFECGACR CNEGRVGRHC
ECSTDEVNSE DMDAYCRKEN SSEICSNNGE CVCGQCVCRK RDNTNEIYSG KFCECDNFNC DRSNGLICGG NGVCRCRVCE CYPNYTGSAC DCSLDTGPCL
ASNGQICNGR GICECGACKC TDPKFQGPTC ETCQTCLGVC AEHKECVQCR AFNKGEKKDT CAQECSHFNL TKVESREKLP QPVQVDPVTH CKEKDIDDCW
FYFTYSVNGN NEAIVHVVET PDCPTGPDII PIVAGVVAGI VLIGLALLLI WKLLMIIHDR REFAKFEKEK MNAKWDTGEN PIYKSAVTTV VNPKYEGK

N-glycosylation sites
Potential sites Identified Peptide＊1
Position Sequon Position Sequence Unique or Shared
25 NRC
50 NTT 34 - 71
SCGECIQAGPNCGWCTNTTFLQEGMPTSARCDDLEALK
Shared ( 2 )
34 - 72
SCGECIQAGPNCGWCTNTTFLQEGMPTSARCDDLEALKK
Shared ( 2 )
34 - 63
SCGECIQAGPNCGWCTNTTFLQEGMPTSAR
Shared ( 2 )
34 - 63
SCGECIQAGPNCGWCTNTTFLQEGMPTSAR
Shared ( 2 )
45 - 63
CGWCTNTTFLQEGMPTSAR
Shared ( 2 )
94 NVT
97 NRS
212 NCT 203 - 220
LRNPCTSEQNCTSPFSYK
Shared ( 14 )
205 - 220
NPCTSEQNCTSPFSYK
Shared ( 2 )
269 NVT
363 NSS 355 - 398
SAVGTLSGNSSNVIQLIIDAYNSLSSEVILENSKLPDGVTINYK
Shared ( 2 )
355 - 369
SAVGTLSGNSSNVIQ
Shared ( 2 )
355 - 388
SAVGTLSGNSSNVIQLIIDAYNSLSSEVILENSK
Shared ( 2 )
406 NGT 399 - 414
SYCKNGVNGTGENGRK
Shared ( 2 )
417 NIS 415 - 434
CSNISIGDEVQFEISITANK
Shared ( 2 )
433 NKC
481 NGT 477 - 495
CHEGNGTFECGACRCNEGR
Shared ( 12 )
464 - 490
CNCQSHGIPASPKCHEGNGTFECGACR
Shared ( 2 )
477 - 490
CHEGNGTFECGACR
Shared ( 12 )
477 - 490
CHEGNGTFECGACR
Shared ( 12 )
520 NSS 518 - 540
KENSSEICSNNGECVCGQCVCRK
Shared ( 2 )
519 - 539
ENSSEICSNNGECVCGQCVCR
Shared ( 2 )
519 - 540
ENSSEICSNNGECVCGQCVCRK
Shared ( 13 )
518 - 539
KENSSEICSNNGECVCGQCVCR
Shared ( 13 )
584 NYT 576 - 610
CRVCECYPNYTGSACDCSLDTGPCLASNGQICNGR
Shared ( 2 )
669 NLT 658 - 672
KDTCAQECSHFNLTK
Shared ( 2 )
658 - 676
KDTCAQECSHFNLTKVESR
Shared ( 2 )
659 - 672
DTCAQECSHFNLTK
Shared ( 2 )
659 - 676
DTCAQECSHFNLTKVESR
Shared ( 2 )
Brain Colon Heart Heart (Left ventricle) Kidney Kidney(Fut9 KO) Kidney(Fut9 WT) Liver Liver: b4GalT-I(+/+) Liver: b4GalT-I(-/-) Lung Serum Skeletal_muscle Stomach Testis
AAL ConA RCA120 Amide80 ConA RCA120 Amide80 ConA RCA120 WFA(+)_SDS-elution AAL ConA RCA120 AAL AAL AAL ConA RCA120 SSA WGA RCA120 RCA120 AAL ConA RCA120 Amide80 Amide80 ConA RCA120 Amide80 ConA RCA120 ConA RCA120
                                                                   
       
 
             
                           
     
           
   
                                     
       
                 
   
   
 
     
   
   
   
                       
           
 
                 
                           
                                     
                                                                   
                                                                   
   
 
 
 
       
   
 
   
   
 
                                                                   
                 
                                               
                           
                                     
                 
                                 
         
         
                                                       
                 
     
                                     
                                                                   
     
                                                 
       
             
                                                   
                 
                                               
     
 
 
 
 
 
   
         
 
   
     
                 
                       
   
       
     
   
         
         
               
   
     
       
                     
   
   
               
   
       
             
                         
                                     
     
         
 
 
     
                         
             
               
   
 
 
 
   
 
 
   
                       
     
                                 
＊1:   _:Potential Sequon     ■:Asn (glycosylated)     ■:Gln (deaminated:pyroGlu)     ■:Met (oxidized)     ■:Cys (carbamidomethylated and deaminated)

External Links

Publications
Nagai-Okatani C, Nishigori M, Sato T, Minamino N, Kaji H, Kuno A Wisteria floribunda agglutinin staining for the quantitative assessment of cardiac fibrogenic activity in a mouse model of dilated cardiomyopathy Laboratory Investigation 2019;99(11):1749–1765 PMID:31253865
Noro E, Togayachi A, Sato T, Tomioka A, Fujita M, Sukegawa M, Suzuki N, Kaji H, Narimatsu H Large-Scale Identification of N-Glycan Glycoproteins Carrying Lewis x and Site-Specific N-Glycan Alterations in Fut9 Knockout Mice. J Proteome Res 2015;14(9):3823-34 PMID:26244810
Sugahara D, Kaji H, Sugihara K, Asano M, Narimatsu H Large-scale identification of target proteins of a glycosyltransferase isozyme by Lectin-IGOT-LC/MS, an LC/MS-based glycoproteomic approach Sci Rep 2012;2(): PMID:23002422
Kaji H, Shikanai T, Sasaki-Sawa A, et al Large-scale Identification of N-Glycosylated Proteins of Mouse Tissues and Construction of a Glycoprotein Database, GlycoProtDB J Proteome Res 2012;11(9):4553-4566 PMID:22823882
Kaji H, Yamauchi Y, Takahashi N, Isobe T Mass spectrometric identification of N-linked glycopeptides using lectin-mediated affinity capture and glycosylation site--specific stable isotope tagging Nat Protocols 2007;1(6):3019-3027 PMID:17406563

Entry information
Entry version 2025-10-17
protein sequence version 2025-10-10
Entry status Latest version
Entry history

create : 2016-12-05

update : 2025-10-17