GGDonto: Genetic Glyco-Diseases Ontology
Legend:
Concept Types
target (pathway-based classification term)
classification term
pathway-based classification term
clinical findings
multiple types disease
single disease
disease type
Genetic disorders of glycan synthesis
'Congenital disorders of glycosylation (CDGs)'
(
Integration tree
)
Pathogenesis (traditional nomenclature)
Genetic disorders of glycan synthesis (traditional nomenclature)
Pathogenesis (new nomenclature)
Genetic disorders of glycan synthesis (new nomenclature)
Congenital disorders of glycosylation (CDGs)
Defects in protein N-glycosylation
Defects in nucleotide-sugar biosynthesis
PMM2-CDG
(GDGDB)
[PMM2]
PMM2-CDG, infantile multisystem stage
[PMM2]
PMM2-CDG, late-infantile and childhood ataxia-intellectual disability stage
[PMM2]
PMM2-CDG, adult stable disability stage
[PMM2]
MPI-CDG
(GDGDB)
[MPI]
PGM1-CDG
[PGM1]
Myasthenia, congenital, with tubular aggregates 1
[GFPT1]
Defects in lipid-linked oligosaccharide biosynthesis
ALG6-CDG
(GDGDB)
[ALG6]
ALG3-CDG
(GDGDB)
[ALG3]
ALG12-CDG
(GDGDB)
[ALG12]
ALG8-CDG
(GDGDB)
[ALG8]
ALG2-CDG
(GDGDB)
[ALG2]
DPAGT1-CDG
(GDGDB)
[DPAGT1]
ALG1-CDG
(GDGDB)
[ALG1]
ALG9-CDG
(GDGDB)
[ALG9]
RFT1-CDG
[RFT1]
DPM3-CDG
[DPM3]
ALG11-CDG
[ALG11]
ALG13-CDG
[ALG13]
Defects in N-glycosylation
TMEM165-CDG
[TMEM165]
Defects in oligosaccharyltransferase subunits
TUSC3-CDG
[TUSC3]
DDOST-CDG
[DDOST]
Defects in N-glycan trimming
GCS1-CDG
(GDGDB)
[GCS1]
Mental retardation, autosomal recessive 15
[MAN1B1]
Defect in N-glycan branching
MGAT2-CDG
(GDGDB)
[MGAT2]
Defects in protein O-glycosylation
Defects in O-mannosylglycan synthesis
POMT1/POMT2-CDG (cong. muscular dystrophy spectrum)
(GDGDB)
[POMT1,POMT2]
POMGNT1-CDG (cong. muscular dystrophy spectrum)
(GDGDB)
[POMGNT1]
LARGE-CDG (cong. muscular dystrophy spectrum)
[LARGE]
FKTN-CDG (cong. muscular dystrophy spectrum)
Fukuyama congenital muscular dystrophy
(GDGDB)
[FKTN]
Muscular dystrophy, limb-girdle, type 2M
(GDGDB)
[FKTN]
Cardiomyopathy, dilated, 1X
(GDGDB)
[FKTN]
FKRP-CDG (cong. muscular dystrophy spectrum)
Muscular dystrophy, congenital, type 1C
(GDGDB)
[FKRP]
Muscular dystrophy, limb-girdle, type 2I
(GDGDB)
[FKRP]
Defects in O-xylosylglycan synthesis
Defective GAG Sulfation
Macular corneal dystrophy
[CHST6]
Chondrodysplasias (CDs)
Spondyloepimetaphyseal dysplasia, pakistani type
[PAPSS2]
Diastrophic dysplasia
[SLC26A2]
Achondrogenesis type IB
[SLC26A2]
Neonatal osseous dysplasia I
[SLC26A2]
Autosomal recessive multiple epiphyseal dysplasia
[SLC26A2]
Spondyloepiphyseal dysplasia with congenital joint dislocations
[CHST3]
Ehlers-Danlos syndrome, musculocontractural type
[CHST14]
Linkage glycan defects
B4GALT7-CDG
[B4GALT7]
Impaired heparan sulfate synthesis
EXT1/EXT2-CDG
[EXT1,EXT2]
Defect in GAG core biosynthesis
Multiple joint dislocations, short stature, craniofacial dysmorphism, and congenital heart defects
[B3GAT3]
Defect in GAG chain polymerization
Temtamy preaxial brachydactyly syndrome
[CHSY1]
Defects in O-GalNAc glycan biosynthesis
Tn polyagglutination syndrome, somatic (SOMATIC MUTATION)
[C1GALT1C1]
GALNT3-CDG
[GALNT3]
Defects in O-fucosylglycan synthesis
B3GALTL-CDG
[B3GALTL]
LFNG-CDG
[LFNG]
Defects in glycosphingolipid and glycosylphosphatidylinositol anchor glycosylation
Disorders of glycosphingolipid biosynthesis
ST3GAL5-CDG
[SIAT9]
Disorders of glycosylphosphatidylinositol anchor biosynthesis
Paroxysmal nocturnal hemoglobinuria, somatic (SOMATIC MUTATION)
(GDGDB)
[PIGA]
PIGM-CDG
[PIGM]
Hyperphosphatasia with mental retardation syndrome 1
[PIGV]
Multiple congenital anomalies-hypotonia-seizures syndrome 1
[PIGN]
Defects in multiple glycosylation and other pathways
DPM1-CDG
(GDGDB)
[DPM1]
MPDU1-CDG
(GDGDB)
[MPDU1]
B4GALT1-CDG
(GDGDB)
[B4GALT1]
GNE-CDG (hereditary inclusion body myopathy)
Hereditary inclusion body myopathy type 2
[GNE]
Nonaka myopathy
(GDGDB)
[GNE]
Defects in dolichol biosynthesis
DOLK-CDG
[TMEM15]
SRD5A3-CDG
[SRD5A3]
Mental retardation, autosomal recessive 12
[ST3GAL3]
Defects in nucleotide-sugar transport
SLC35C1-CDG
(GDGDB)
[SLC35C1]
SLC35A1-CDG
[SLC35A1]
SLC35D1-CDG
[SLC35D1]
Defects in vesicular transport
SEC23B-CDG
(GDGDB)
[SEC23B]
Defects in COG protein complex
COG7-CDG
(GDGDB)
[COG7]
COG1-CDG
[COG1]
COG8-CDG
[COG8]
COG5-CDG
[COG5]
COG4-CDG
[COG4]
COG6-CDG
[COG6]
Defect in V-ATPase a2 subunit
ATP6VOA2-CDG
[ATP6V0A2]
Genetic disorders of glycan synthesis (by systems, signs and symptoms)
Genetic disorders of glycan synthesis (by systems, signs and symptoms)
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